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» A Practical Algorithm to Find the Best Subsequence Patterns
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PR
2007
134views more  PR 2007»
13 years 6 months ago
An elastic partial shape matching technique
We consider the problem of partial shape matching. We propose to transform shapes into sequences and utilize an algorithm that determines a subsequence of a target sequence that b...
Longin Jan Latecki, Vasileios Megalooikonomou, Qia...
ICDE
2010
IEEE
750views Database» more  ICDE 2010»
13 years 11 months ago
Efficient and accurate discovery of patterns in sequence datasets
Existing sequence mining algorithms mostly focus on mining for subsequences. However, a large class of applications, such as biological DNA and protein motif mining, require effici...
Avrilia Floratou, Sandeep Tata, Jignesh M. Patel
WEA
2010
Springer
545views Algorithms» more  WEA 2010»
14 years 2 months ago
Experiments on Union-Find Algorithms for the Disjoint-Set Data Structure
Abstract. The disjoint-set data structure is used to maintain a collection of non-overlapping sets of elements from a finite universe. Algorithms that operate on this data structu...
Md. Mostofa Ali Patwary, Jean R. S. Blair, Fredrik...
SDM
2011
SIAM
242views Data Mining» more  SDM 2011»
12 years 10 months ago
Fast Algorithms for Finding Extremal Sets
Identifying the extremal (minimal and maximal) sets from a collection of sets is an important subproblem in the areas of data-mining and satisfiability checking. For example, ext...
Roberto J. Bayardo, Biswanath Panda
WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
13 years 11 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert