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BMCBI
2010
136views more  BMCBI 2010»
13 years 7 months ago
SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale
Background: An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed...
Tamás Nepusz, Rajkumar Sasidharan, Alberto ...
DMKD
2004
ACM
127views Data Mining» more  DMKD 2004»
14 years 26 days ago
Discovering spatial patterns accurately with effective noise removal
Cluster analysis is a common approach to pattern discovery in spatial databases. While many clustering techniques have been developed, it is still challenging to discover implicit...
Yu Qian, Kang Zhang
SBP
2010
Springer
14 years 17 days ago
Social Network Data and Practices: The Case of Friendfeed
Due to their large worldwide adoption, Social Network Sites (SNSs) have been widely used in many global events as an important source to spread news and information. While the sear...
Fabio Celli, F. Marta L. Di Lascio, Matteo Magnani...
KDD
2010
ACM
245views Data Mining» more  KDD 2010»
13 years 11 months ago
Flexible constrained spectral clustering
Constrained clustering has been well-studied for algorithms like K-means and hierarchical agglomerative clustering. However, how to encode constraints into spectral clustering rem...
Xiang Wang, Ian Davidson
BMCBI
2010
214views more  BMCBI 2010»
13 years 7 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper