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SAC
2009
ACM
14 years 2 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
ASPLOS
2009
ACM
13 years 11 months ago
Accelerating phase unwrapping and affine transformations for optical quadrature microscopy using CUDA
Optical Quadrature Microscopy (OQM) is a process which uses phase data to capture information about the sample being studied. OQM is part of an imaging framework developed by the ...
Perhaad Mistry, Sherman Braganza, David R. Kaeli, ...
SIGSOFT
2007
ACM
14 years 8 months ago
State space exploration using feedback constraint generation and Monte-Carlo sampling
The systematic exploration of the space of all the behaviours of a software system forms the basis of numerous approaches to verification. However, existing approaches face many c...
Sriram Sankaranarayanan, Richard M. Chang, Guofei ...
PPAM
2007
Springer
14 years 1 months ago
Enhancing Productivity in High Performance Computing through Systematic Conditioning
Abstract. In order to take full advantage of high-end computing platforms, scientific applications often require modifications to source codes, and to their build systems that ge...
Magdalena Slawiñska, Jaroslaw Slawinski, Va...
ICSE
2008
IEEE-ACM
14 years 7 months ago
The economy of collective attention for situated knowledge collaboration in software development
Because the knowledge required for the construction of a complex software system is often widely distributed among its members, programmers routinely engage in collaboration with ...
Yunwen Ye, Kumiyo Nakakoji, Yasuhiro Yamamoto