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» A Query System in a Biological Database
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BMCBI
2006
147views more  BMCBI 2006»
15 years 4 months ago
QPath: a method for querying pathways in a protein-protein interaction network
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sh...
SIGMOD
2002
ACM
137views Database» more  SIGMOD 2002»
15 years 4 months ago
Partial results for online query processing
Traditional query processors generate full, accurate query results, either in batch or in pipelined fashion. We argue that this strict model is too rigid for exploratory queries o...
Vijayshankar Raman, Joseph M. Hellerstein
IDEAS
2007
IEEE
146views Database» more  IDEAS 2007»
15 years 11 months ago
Approximate Structural Matching over Ordered XML Documents
There is an increasing need for an XML query engine that not only searches for exact matches to a query but also returns “query-like” structures. We have designed and develope...
Nitin Agarwal, Magdiel Galan Oliveras, Yi Chen
SIGMOD
2006
ACM
109views Database» more  SIGMOD 2006»
16 years 4 months ago
OMCAT: optimal maintenance of continuous queries' answers for trajectories
We present our prototype system, OMCAT, which optimizes the reevaluation of a set of pending continuous spatio-temporal queries on trajectory data, when some of the trajectories a...
Hui Ding, Goce Trajcevski, Peter Scheuermann
SIGMOD
2012
ACM
275views Database» more  SIGMOD 2012»
13 years 7 months ago
Computational reproducibility: state-of-the-art, challenges, and database research opportunities
Computational experiments have become an integral part of the scientific method, but reproducing, archiving, and querying them is still a challenge. The first barrier to a wider...
Juliana Freire, Philippe Bonnet, Dennis Shasha