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BMCBI
2006
180views more  BMCBI 2006»
15 years 4 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
CPHYSICS
2007
222views more  CPHYSICS 2007»
15 years 4 months ago
JADAMILU: a software code for computing selected eigenvalues of large sparse symmetric matrices
A new software code for computing selected eigenvalues and associated eigenvectors of a real symmetric matrix is described. The eigenvalues are either the smallest or those closes...
Matthias Bollhöfer, Yvan Notay
BMCBI
2005
115views more  BMCBI 2005»
15 years 3 months ago
Graphical representation of ribosomal RNA probe accessibility data using ARB software package
Background: Taxon specific hybridization probes in combination with a variety of commonly used hybridization formats nowadays are standard tools in microbial identification. A fre...
Yadhu Kumar, Ralf Westram, Sebastian Behrens, Bern...
BMCBI
2005
101views more  BMCBI 2005»
15 years 3 months ago
TmaDB: a repository for tissue microarray data
Background: Tissue microarray (TMA) technology has been developed to facilitate large, genome-scale molecular pathology studies. This technique provides a high-throughput method f...
Archana Sharma-Oates, Philip Quirke, David R. West...
BMCBI
2004
106views more  BMCBI 2004»
15 years 3 months ago
ESTIMA, a tool for EST management in a multi-project environment
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
Charu G. Kumar, Richard LeDuc, George Gong, Levan ...