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HPCC
2007
Springer
14 years 1 months ago
An Adaptive Parallel Hierarchical Clustering Algorithm
Clustering of data has numerous applications and has been studied extensively. It is very important in Bioinformatics and data mining. Though many parallel algorithms have been des...
Zhaopeng Li, Kenli Li, Degui Xiao, Lei Yang
SPAA
2012
ACM
11 years 10 months ago
SALSA: scalable and low synchronization NUMA-aware algorithm for producer-consumer pools
We present a highly-scalable non-blocking producer-consumer task pool, designed with a special emphasis on lightweight synchronization and data locality. The core building block o...
Elad Gidron, Idit Keidar, Dmitri Perelman, Yonatha...
SDM
2009
SIAM
251views Data Mining» more  SDM 2009»
14 years 4 months ago
High Performance Parallel/Distributed Biclustering Using Barycenter Heuristic.
Biclustering refers to simultaneous clustering of objects and their features. Use of biclustering is gaining momentum in areas such as text mining, gene expression analysis and co...
Alok N. Choudhary, Arifa Nisar, Waseem Ahmad, Wei-...
IPPS
2002
IEEE
14 years 17 days ago
Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways
Systemic pathways-oriented approaches to analysis of metabolic networks are effective for small networks but are computationally infeasible for genome scale networks. Current comp...
Nagiza F. Samatova, Al Geist, George Ostrouchov, A...
IPPS
2006
IEEE
14 years 1 months ago
Effecting parallel graph eigensolvers through library composition
— Many interesting problems in graph theory can be reduced to solving an eigenproblem of the adjacency matrix or Laplacian of a graph. Given the availability of high-quality line...
A. Breuer, Peter Gottschling, Douglas Gregor, Andr...