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» A Sequence Alignment Model Based on the Averaged Perceptron
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BIOINFORMATICS
2010
127views more  BIOINFORMATICS 2010»
13 years 8 months ago
Analyzing taxonomic classification using extensible Markov models
Motivation: As next generation sequencing is rapidly adding new genomes, their correct placement in the taxonomy needs verification. However, the current methods for confirming cl...
Rao M. Kotamarti, Michael Hahsler, Douglas Raiford...
CIKM
2010
Springer
13 years 6 months ago
Rank learning for factoid question answering with linguistic and semantic constraints
This work presents a general rank-learning framework for passage ranking within Question Answering (QA) systems using linguistic and semantic features. The framework enables query...
Matthew W. Bilotti, Jonathan L. Elsas, Jaime G. Ca...
BMCBI
2006
87views more  BMCBI 2006»
13 years 8 months ago
Phylogeny based discovery of regulatory elements
Background: Algorithms that locate evolutionarily conserved sequences have become powerful tools for finding functional DNA elements, including transcription factor binding sites;...
Jason Gertz, Justin C. Fay, Barak A. Cohen
BMCBI
2011
12 years 11 months ago
Conotoxin Protein Classification Using Free Scores of Words and Support Vector Machines
Background: Conotoxin has been proven to be effective in drug design and could be used to treat various disorders such as schizophrenia, neuromuscular disorders and chronic pain. ...
Nazar Zaki, Stefan Wolfsheimer, Grégory Nue...
FBIT
2007
IEEE
13 years 11 months ago
Mapping Genetic Influences on Brain Shape Using Multi-Atlas Fluid Image Alignment
In this pilot study, we developed a set of computer vision based surface segmentation and statistical shape analysis algorithms to study genetic influences on brain structure in a...
Meena Mani, Yi-Yu Chou, Natasha Lepore, Agatha D. ...