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BMCBI
2008
77views more  BMCBI 2008»
13 years 7 months ago
SeqAn An efficient, generic C++ library for sequence analysis
Background: The use of novel algorithmic techniques is pivotal to many important problems in life science. For example the sequencing of the human genome [1] would not have been p...
Andreas Döring, David Weese, Tobias Rausch, K...
IJIT
2004
13 years 9 months ago
Computing Entropy for Ortholog Detection
Abstract-- Biological sequences from different species are called orthologs if they evolved from a sequence of a common ancestor species and they have the same biological function....
Hsing-Kuo Pao, John Case
ICDM
2006
IEEE
135views Data Mining» more  ICDM 2006»
14 years 1 months ago
Discovering Frequent Poly-Regions in DNA Sequences
The problem of discovering arrangements of regions of high occurrence of one or more items of a given alphabet in a sequence, is studied, and two efficient approaches are propose...
Panagiotis Papapetrou, Gary Benson, George Kollios
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...
TIP
2011
123views more  TIP 2011»
13 years 2 months ago
Spatial Sparsity-Induced Prediction (SIP) for Images and Video: A Simple Way to Reject Structured Interference
We propose a prediction technique that is geared toward forming successful estimates of a signal based on a correlated anchor signal that is contaminated with complex interference...
Gang Hua, Onur G. Guleryuz