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BMCBI
2010
118views more  BMCBI 2010»
13 years 7 months ago
Testing for mean and correlation changes in microarray experiments: an application for pathway analysis
Background: Microarray experiments examine the change in transcript levels of tens of thousands of genes simultaneously. To derive meaningful data, biologists investigate the resp...
Mayer Alvo, Zhongzhu Liu, Andrew Williams, Carole ...
IPPS
1997
IEEE
13 years 12 months ago
External Adjustment of Runtime Parameters in Time Warp Synchronized Parallel Simulators
Several optimizations to the Time Warp synchronization protocol for parallel discrete event simulation have been proposed and studied. Many of these optimizations have included so...
Radharamanan Radhakrishnan, Lantz Moore, Philip A....
BMCBI
2008
103views more  BMCBI 2008»
13 years 7 months ago
Parameter estimation for robust HMM analysis of ChIP-chip data
Background: Tiling arrays are an important tool for the study of transcriptional activity, proteinDNA interactions and chromatin structure on a genome-wide scale at high resolutio...
Peter Humburg, David Bulger, Glenn Stone
BMCBI
2006
116views more  BMCBI 2006»
13 years 7 months ago
Cluster analysis for DNA methylation profiles having a detection threshold
Background: DNA methylation, a molecular feature used to investigate tumor heterogeneity, can be measured on many genomic regions using the MethyLight technology. Due to the combi...
Paul Marjoram, Jing Chang, Peter W. Laird, Kimberl...
CGF
1999
79views more  CGF 1999»
13 years 7 months ago
A Practical Analysis of Clustering Strategies for Hierarchical Radiosity
The calculation of radiant energy balance in complex scenes has been made possible by hierarchical radiosity methods based on clustering mechanisms. Although clustering offers an ...
Jean-Marc Hasenfratz, Cyrille Damez, Franço...