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BMCBI
2011
12 years 11 months ago
Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks v
Background: Constraint-based approaches facilitate the prediction of cellular metabolic capabilities, based, in turn on predictions of the repertoire of enzymes encoded in the gen...
Jacek Sroka, Lukasz Bieniasz-Krzywiec, Szymon Gwoz...
BMCBI
2010
145views more  BMCBI 2010»
13 years 7 months ago
Clustering metagenomic sequences with interpolated Markov models
Background: Sequencing of environmental DNA (often called metagenomics) has shown tremendous potential to uncover the vast number of unknown microbes that cannot be cultured and s...
David R. Kelley, Steven L. Salzberg
INFOCOM
2009
IEEE
14 years 2 months ago
A Queueing Model Framework of PCE-Based Inter-Area Path Computation
Abstract—Path computation elements (PCE’s) are used to compute end-to-end paths across multiple areas. Multiple PCE’s may be dedicated to each area to provide sufficient path...
Juanjuan Yu, Yue He, Kai Wu, Marco Tacca, Andrea F...
ER
2009
Springer
316views Database» more  ER 2009»
13 years 11 months ago
XMI2USE: A Tool for Transforming XMI to USE Specifications
Abstract. The UML-based Specification Environment (USE) tool supports the syntactic analysis, type checking, consistency checking, and dynamic validation of invariants and pre-/pos...
Wuliang Sun, Eunjee Song, Paul C. Grabow, Devon M....
EUMAS
2006
13 years 9 months ago
Agent Capability: Automating the Design to Code Process
Current IT application domains such as web services and autonomic computing call for highly flexible systems, able to automatically adapt to changing operational environments as w...
Loris Penserini, Anna Perini, Angelo Susi, John My...