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» A Stochastic Semantics for BioAmbients
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ICLP
2010
Springer
13 years 11 months ago
A Logical Paradigm for Systems Biology (Invited Talk)
[6]. An SBML model can be interpreted in Biocham at three abstraction levels: • the Boolean semantics (asynchronuous Boolean state transitions on the presence/absence of molecule...
François Fages
IJCAI
2003
13 years 8 months ago
Scenario-based Stochastic Constraint Programming
To model combinatorial decision problems involving uncertainty and probability, we extend the stochastic constraint programming framework proposed in [Walsh, 2002] along a number ...
Suresh Manandhar, Armagan Tarim, Toby Walsh
BIRTHDAY
2009
Springer
13 years 5 months ago
Structural Operational Semantics for Weighted Transition Systems
Weighted transition systems are defined, parametrized by a commutative monoid of weights. These systems are further understood as coalgebras for functors of a specific form. A gene...
Bartek Klin
TCS
2008
13 years 7 months ago
On process rate semantics
We provide translations between process algebra and systems of chemical reactions. We show that the translations preserve discrete-state (stochastic) and continuous-state (concent...
Luca Cardelli
AB
2007
Springer
14 years 1 months ago
A Stochastic Pi Calculus for Concurrent Objects
We present SpiCO, a new modeling and simulation language for systems biology. SpiCO is based on the stochastic π-calculus. It supports higher level modeling via multi-profile con...
Céline Kuttler, Cédric Lhoussaine, J...