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» A Systematic Analysis Patterns Specification
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BMCBI
2010
155views more  BMCBI 2010»
13 years 10 months ago
BISMA - Fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences
Background: Bisulfite sequencing is a popular method to analyze DNA methylation patterns at high resolution. A region of interest is targeted by PCR and about 20-50 subcloned DNA ...
Christian Rohde, Yingying Zhang, Richard Reinhardt...
BMCBI
2010
142views more  BMCBI 2010»
13 years 10 months ago
Classification of protein sequences by means of irredundant patterns
Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
Matteo Comin, Davide Verzotto
EMSOFT
2010
Springer
13 years 8 months ago
Initiating a design pattern catalog for embedded network systems
In the domain of desktop software, design patterns have had a profound impact; they are applied ubiquitously across a broad range of applications. Patterns serve both to promulgat...
Sally K. Wahba, Jason O. Hallstrom, Neelam Soundar...
KDD
2004
ACM
124views Data Mining» more  KDD 2004»
14 years 10 months ago
Support envelopes: a technique for exploring the structure of association patterns
This paper introduces support envelopes--a new tool for analyzing association patterns--and illustrates some of their properties, applications, and possible extensions. Specifical...
Michael Steinbach, Pang-Ning Tan, Vipin Kumar
BMCBI
2008
129views more  BMCBI 2008»
13 years 10 months ago
Triad pattern algorithm for predicting strong promoter candidates in bacterial genomes
Background: Bacterial promoters, which increase the efficiency of gene expression, differ from other promoters by several characteristics. This difference, not yet widely exploite...
Michael Dekhtyar, Amelie Morin, Vehary Sakanyan