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» A Theoretical Analysis of Scalability of the Parallel Genome...
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ICS
2009
Tsinghua U.
14 years 2 months ago
Dynamic topology aware load balancing algorithms for molecular dynamics applications
Molecular Dynamics applications enhance our understanding of biological phenomena through bio-molecular simulations. Large-scale parallelization of MD simulations is challenging b...
Abhinav Bhatele, Laxmikant V. Kalé, Sameer ...
ICCS
2009
Springer
14 years 1 months ago
GPU Accelerated RNA Folding Algorithm
Many bioinformatics studies require the analysis of RNA or DNA structures. More specifically, extensive work is done to elaborate efficient algorithms able to predict the 2-D fold...
Guillaume Rizk, Dominique Lavenier
ICDM
2010
IEEE
264views Data Mining» more  ICDM 2010»
13 years 5 months ago
Block-GP: Scalable Gaussian Process Regression for Multimodal Data
Regression problems on massive data sets are ubiquitous in many application domains including the Internet, earth and space sciences, and finances. In many cases, regression algori...
Kamalika Das, Ashok N. Srivastava
KDD
2012
ACM
235views Data Mining» more  KDD 2012»
11 years 9 months ago
A near-linear time approximation algorithm for angle-based outlier detection in high-dimensional data
Outlier mining in d-dimensional point sets is a fundamental and well studied data mining task due to its variety of applications. Most such applications arise in high-dimensional ...
Ninh Pham, Rasmus Pagh
HIPC
2005
Springer
14 years 28 days ago
Design and Implementation of the HPCS Graph Analysis Benchmark on Symmetric Multiprocessors
Graph theoretic problems are representative of fundamental computations in traditional and emerging scientific disciplines like scientific computing, computational biology and b...
David A. Bader, Kamesh Madduri