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» A Windows-Based Parallel File System
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MST
2002
128views more  MST 2002»
13 years 7 months ago
A Simple and Efficient Parallel Disk Mergesort
External sorting--the process of sorting a file that is too large to fit into the computer's internal memory and must be stored externally on disks--is a fundamental subroutin...
Rakesh D. Barve, Jeffrey Scott Vitter
ICS
2009
Tsinghua U.
14 years 2 months ago
QuakeTM: parallelizing a complex sequential application using transactional memory
“Is transactional memory useful?” is the question that cannot be answered until we provide substantial applications that can evaluate its capabilities. While existing TM appli...
Vladimir Gajinov, Ferad Zyulkyarov, Osman S. Unsal...
CLUSTER
2003
IEEE
14 years 28 days ago
A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters
In this paper we analyze the I/O access patterns of a widely-used biological sequence search tool and implement two variations that employ parallel-I/O for data access based on PV...
Yifeng Zhu, Hong Jiang, Xiao Qin, David R. Swanson
PVLDB
2008
182views more  PVLDB 2008»
13 years 7 months ago
SCOPE: easy and efficient parallel processing of massive data sets
Companies providing cloud-scale services have an increasing need to store and analyze massive data sets such as search logs and click streams. For cost and performance reasons, pr...
Ronnie Chaiken, Bob Jenkins, Per-Åke Larson,...
BMCBI
2011
13 years 2 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura