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BMCBI
2010
205views more  BMCBI 2010»
13 years 8 months ago
A fast indexing approach for protein structure comparison
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...
CLEF
2008
Springer
13 years 9 months ago
Cheshire at GeoCLEF 2008: Text and Fusion Approaches for GIR
In this paper we will briefly describe the approaches taken by Berkeley for the main GeoCLEF 2008 tasks (Mono and Bilingual retrieval). The approach this year used probabilistic t...
Ray R. Larson
DEBU
2007
142views more  DEBU 2007»
13 years 8 months ago
Multi-lingual Indexing Support for CLIR using Language Modeling
An indexing model is the heart of an Information Retrieval (IR) system. Data structures such as term based inverted indices have proved to be very effective for IR using vector sp...
Prasad Pingali, Vasudeva Varma
FLAIRS
2004
13 years 9 months ago
Towards Acquiring Case Indexing Taxonomies From Text
Taxonomic case-based reasoning is a conversational casebased reasoning methodology that employs feature subsumption taxonomies for incremental case retrieval. Although this approa...
Kalyan Moy Gupta, David W. Aha
CIKM
2005
Springer
14 years 1 months ago
Exact match search in sequence data using suffix trees
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...