Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...
In this paper we will briefly describe the approaches taken by Berkeley for the main GeoCLEF 2008 tasks (Mono and Bilingual retrieval). The approach this year used probabilistic t...
An indexing model is the heart of an Information Retrieval (IR) system. Data structures such as term based inverted indices have proved to be very effective for IR using vector sp...
Taxonomic case-based reasoning is a conversational casebased reasoning methodology that employs feature subsumption taxonomies for incremental case retrieval. Although this approa...
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...