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» A cluster validity framework for genome expression data
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147
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BMCBI
2008
166views more  BMCBI 2008»
15 years 3 months ago
Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies
Background: The analysis of large-scale data sets via clustering techniques is utilized in a number of applications. Biclustering in particular has emerged as an important problem...
Peter A. DiMaggio Jr., Scott R. McAllister, Christ...
126
Voted
SGAI
2007
Springer
15 years 9 months ago
Metrics for Mining Multisets
Abstract. We propose a new class of distance measures (metrics) designed for multisets, both of which are a recurrent theme in many data mining applications. One particular instanc...
Walter A. Kosters, Jeroen F. J. Laros
236
Voted
ICDE
2009
IEEE
155views Database» more  ICDE 2009»
16 years 5 months ago
Finding Time-Lagged 3D Clusters
Existing 3D clustering algorithms on gene ? sample ? time expression data do not consider the time lags between correlated gene expression patterns. Besides, they either ignore the...
Xin Xu, Ying Lu, Kian-Lee Tan, Anthony K. H. Tung
138
Voted
NAR
2002
141views more  NAR 2002»
15 years 3 months ago
Co-expression pattern from DNA microarray experiments as a tool for operon prediction
The prediction of operons, the smallest unit of transcription in prokaryotes, is the first step towards reconstruction of a regulatory network at the whole genome level. Sequence ...
Chiara Sabatti, Lars Rohlin, Min-Kyu Oh, James C. ...
111
Voted
ISPA
2005
Springer
15 years 9 months ago
COMPACT: A Comparative Package for Clustering Assessment
Abstract. There exist numerous algorithms that cluster data-points from largescale genomic experiments such as sequencing, gene-expression and proteomics. Such algorithms may emplo...
Roy Varshavsky, Michal Linial, David Horn