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» A complex biological database querying method
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BIRTHDAY
2010
Springer
14 years 19 days ago
Indexing and Searching a Mass Spectrometry Database
Abstract. Database preprocessing in order to create an index often permits considerable speedup in search compared to the iterated query of an unprocessed database. In this paper w...
Søren Besenbacher, Benno Schwikowski, Jens ...
BMCBI
2011
12 years 11 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
BDA
2007
13 years 9 months ago
Hyperplane Queries in a Feature-Space M-tree for Speeding up Active Learning
In content-based retrieval, relevance feedback (RF) is a noticeable method for reducing the “semantic gap” between the low-level features describing the content and the usually...
Michel Crucianu, Daniel Estevez, Vincent Oria, Jea...
BMCBI
2010
164views more  BMCBI 2010»
13 years 7 months ago
Flexible network reconstruction from relational databases with Cytoscape and CytoSQL
Background: Molecular interaction networks can be efficiently studied using network visualization software such as Cytoscape. The relevant nodes, edges and their attributes can be...
Kris Laukens, Jens Hollunder, Thanh Hai Dang, Geer...
DNIS
2005
Springer
112views Database» more  DNIS 2005»
14 years 1 months ago
Modelling Peer-to-Peer Data Networks Under Complex System Theory
: A Peer-to-peer Data Network (PDN) is an open and evolving society of peer nodes that assemble into a network to share their data for mutual benefit. PDNs are enabled by distribu...
Cyrus Shahabi, Farnoush Banaei Kashani