Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Background: The Cell Ontology (CL) is an ontology for the representation of in vivo cell types. As biological ontologies such as the CL grow in complexity, they become increasingl...
Terrence F. Meehan, Anna Maria Masci, Amina Abdull...
Background: Protein identification based on mass spectrometry (MS) has previously been performed using peptide mass fingerprinting (PMF) or tandem MS (MS/MS) database searching. H...
Metabolomics is the omics science of biochemistry. The associated data include the quantitative measurements of all small molecule metabolites in a biological sample. These datase...
This paperdescribes the use of a powerful graph query language for querying programs, and a novel combination of transformations for generating efficient implementations of the q...
K. Tuncay Tekle, Michael Gorbovitski, Yanhong A. L...