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» A complex biological database querying method
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BMCBI
2010
122views more  BMCBI 2010»
13 years 7 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
ICDE
2009
IEEE
159views Database» more  ICDE 2009»
14 years 9 months ago
Sketch-Based Summarization of Ordered XML Streams
XML streams, such as RSS feeds or complex event streams, are becoming increasingly pervasive as they provide the foundation for a wide range of emerging applications. An important...
Veronica Mayorga, Neoklis Polyzotis
DMS
2010
189views Multimedia» more  DMS 2010»
13 years 5 months ago
Visualizing the Commonalities Between Hierarchically Structured Data Queries
Abstract--In this paper we present an information visualization approach for visualizing the intersection between multiple feature hierarchies. In cases where a dataset has multipl...
Chad Jones, Ryan Armstrong, Kwan-Liu Ma
IPPS
2002
IEEE
14 years 15 days ago
Improving Performance of Multiple Sequence Alignment Analysis in Multi-Client Environments
This paper is concerned with the efficient execution of multiplesequence alignmentmethodsin a multipleclientenvironment. Multiple sequence alignment (MSA) is a computationally ex...
Ümit V. Çatalyürek, Eric Stahlber...
ICDE
1999
IEEE
89views Database» more  ICDE 1999»
14 years 9 months ago
Relative Prefix Sums: An Efficient Approach for Querying Dynamic OLAP Data Cubes
Range sum queries on data cubes are a powerful tool for analysis. A range sum query applies an aggregation operation (e.g., SUM) over all selected cells in a data cube, where the ...
Steven Geffner, Divyakant Agrawal, Amr El Abbadi, ...