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» A complex biological database querying method
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BMCBI
2006
107views more  BMCBI 2006»
13 years 7 months ago
CROPPER: a metagene creator resource for cross-platform and cross-species compendium studies
Background: Current genomic research methods provide researchers with enormous amounts of data. Combining data from different high-throughput research technologies commonly availa...
Jussi Paananen, Markus Storvik, Garry Wong
BIBE
2001
IEEE
193views Bioinformatics» more  BIBE 2001»
13 years 11 months ago
GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data
Effective analysis of genome sequences and associated functional data requires access to many different kinds of biological information. For example, when analysing gene expressio...
Mike Cornell, Norman W. Paton, Shengli Wu, Carole ...
BIOCOMP
2009
13 years 8 months ago
Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
Gina Cooper, Michael L. Raymer
SIGMOD
2003
ACM
190views Database» more  SIGMOD 2003»
14 years 7 months ago
Hardware Acceleration for Spatial Selections and Joins
Spatial database operations are typically performed in two steps. In the filtering step, indexes and the minimum bounding rectangles (MBRs) of the objects are used to quickly dete...
Chengyu Sun, Divyakant Agrawal, Amr El Abbadi
SSDBM
2006
IEEE
156views Database» more  SSDBM 2006»
14 years 1 months ago
On Data and Visualization Models for Signaling Pathways
Signaling pathways are chains of interacting proteins, through which the cell converts a (usually) extracellular signal into a biological response. The number of known signaling p...
Nattakarn Ratprasartporn, Ali Cakmak, Gultekin &Ou...