— Replica exchange is a powerful sampling algorithm and can be effectively used for applications such as simulating the structure, function, folding, and dynamics of proteins and...
This paper presents a publish/subscribe based asynchronous remote method invocation framework (PARMI) aiming to improve performance and programming flexibility. PARMI enables high-...
There is an increasing trends towards distributed and shared repositories for storing scientific datasets. Developing applications that retrieve and process data from such reposit...
— This paper presents Salsa, a novel, decentralized and asynchronous realization of the “replica exchange” algorithm for simulating the structure, function, folding, and dyna...
Li Zhang, Manish Parashar, Emilio Gallicchio, Rona...