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» A factor analysis model for functional genomics
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IJCAI
2007
13 years 9 months ago
A Factor Graph Model for Software Bug Finding
Automatic tools for finding software errors require knowledge of the rules a program must obey, or “specifications,” before they can identify bugs. We present a method that ...
Ted Kremenek, Andrew Y. Ng, Dawson R. Engler
BMCBI
2010
124views more  BMCBI 2010»
13 years 8 months ago
A factor model to analyze heterogeneity in gene expression
Background: Microarray technology allows the simultaneous analysis of thousands of genes within a single experiment. Significance analyses of transcriptomic data ignore the gene d...
Yuna Blum, Guillaume Le Mignon, Sandrine Lagarrigu...
ICMLA
2007
13 years 9 months ago
Maximum Likelihood Quantization of Genomic Features Using Dynamic Programming
Dynamic programming is introduced to quantize a continuous random variable into a discrete random variable. Quantization is often useful before statistical analysis or reconstruct...
Mingzhou (Joe) Song, Robert M. Haralick, Sté...
BMCBI
2004
91views more  BMCBI 2004»
13 years 7 months ago
SIGI: score-based identification of genomic islands
Background: Genomic islands can be observed in many microbial genomes. These stretches of DNA have a conspicuous composition with regard to sequence or encoded functions. Genomic ...
Rainer Merkl
BMCBI
2006
170views more  BMCBI 2006»
13 years 8 months ago
Biclustering of gene expression data by non-smooth non-negative matrix factorization
Background: The extended use of microarray technologies has enabled the generation and accumulation of gene expression datasets that contain expression levels of thousands of gene...
Pedro Carmona-Saez, Roberto D. Pascual-Marqui, Fra...