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» A factor analysis model for functional genomics
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EC
2006
136views ECommerce» more  EC 2006»
13 years 8 months ago
Error Thresholds in Genetic Algorithms
The error threshold of replication is an important notion of the quasispecies evolution model; it is a critical mutation rate (error rate) beyond which structures obtained by an e...
Gabriela Ochoa
BMCBI
2008
118views more  BMCBI 2008»
13 years 8 months ago
Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
Background: The detection of conserved motifs in promoters of orthologous genes (phylogenetic footprints) has become a common strategy to predict cis-acting regulatory elements. S...
Rekin's Janky, Jacques van Helden
RECOMB
2012
Springer
11 years 10 months ago
Recovering the Tree-Like Trend of Evolution Despite Extensive Lateral Genetic Transfer: A Probabilistic Analysis
Abstract. Lateral gene transfer (LGT) is a common mechanism of nonvertical evolution where genetic material is transferred between two more or less distantly related organisms. It ...
Sebastien Roch, Sagi Snir
ALIFE
2008
13 years 8 months ago
Hierarchical Self-Organization in the Finitary Process Soup
Current analyses of genomes from numerous species show that the diversity of organism's functional and behavioral characters is not proportional to the number of genes that e...
Olof Görnerup, James P. Crutchfield
AAAI
2012
11 years 10 months ago
Transfer Learning with Graph Co-Regularization
Transfer learning proves to be effective for leveraging labeled data in the source domain to build an accurate classifier in the target domain. The basic assumption behind transf...
Mingsheng Long, Jianmin Wang 0001, Guiguang Ding, ...