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» A fast indexing approach for protein structure comparison
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FUN
2010
Springer
247views Algorithms» more  FUN 2010»
14 years 15 days ago
A Fun Application of Compact Data Structures to Indexing Geographic Data
The way memory hierarchy has evolved in recent decades has opened new challenges in the development of indexing structures in general and spatial access methods in particular. In t...
Nieves R. Brisaboa, Miguel Rodríguez Luaces...
BMCBI
2008
112views more  BMCBI 2008»
13 years 7 months ago
A simplified approach to disulfide connectivity prediction from protein sequences
Background: Prediction of disulfide bridges from protein sequences is useful for characterizing structural and functional properties of proteins. Several methods based on differen...
Marc Vincent, Andrea Passerini, Matthieu Labb&eacu...
ICDE
2006
IEEE
239views Database» more  ICDE 2006»
14 years 1 months ago
Grid Representation for Efficient Similarity Search in Time Series Databases
Widespread interest in time-series similarity search has made more in need of efficient technique, which can reduce dimensionality of the data and then to index it easily using a ...
Guifang Duan, Yu Suzuki, Kyoji Kawagoe
CSB
2004
IEEE
142views Bioinformatics» more  CSB 2004»
13 years 11 months ago
FastR: Fast Database Search Tool for Non-Coding RNA
The discovery of novel non-coding RNAs has been among the most exciting recent developments in Biology. Yet, many more remain undiscovered. It has been hypothesized that there is ...
Vineet Bafna, Shaojie Zhang
BMCBI
2010
139views more  BMCBI 2010»
13 years 7 months ago
A global optimization algorithm for protein surface alignment
Background: A relevant problem in drug design is the comparison and recognition of protein binding sites. Binding sites recognition is generally based on geometry often combined w...
Paola Bertolazzi, Concettina Guerra, Giampaolo Liu...