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» A fast indexing approach for protein structure comparison
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BMCBI
2006
101views more  BMCBI 2006»
13 years 7 months ago
Predicting residue contacts using pragmatic correlated mutations method: reducing the false positives
Background: Predicting residues' contacts using primary amino acid sequence alone is an important task that can guide 3D structure modeling and can verify the quality of the ...
Petras J. Kundrotas, Emil Alexov
JCC
2006
110views more  JCC 2006»
13 years 7 months ago
Using internal and collective variables in Monte Carlo simulations of nucleic acid structures: Chain breakage/closure algorithm
: This article describes a method for solving the geometric closure problem for simplified models of nucleic acid structures by using the constant bond lengths approximation. The r...
Heinz Sklenar, Daniel Wüstner, Remo Rohs
RIAO
2007
13 years 9 months ago
An Information Retrieval Driven by Ontology: from Query to Document Expansion
The paper proposes an approach to information retrieval based on the use of a structure (ontology) both for document (resp. query) indexing and query evaluating. The conceptual st...
Mustapha Baziz, Mohand Boughanem, Gabriella Pasi, ...
DASFAA
2007
IEEE
138views Database» more  DASFAA 2007»
14 years 2 months ago
An Original Semantics to Keyword Queries for XML Using Structural Patterns
XML is by now the de facto standard for exporting and exchanging data on the web. The need for querying XML data sources whose structure is not fully known to the user and the need...
Dimitri Theodoratos, Xiaoying Wu
DASFAA
2008
IEEE
190views Database» more  DASFAA 2008»
14 years 2 months ago
Analysis of Time Series Using Compact Model-Based Descriptions
Abstract. Recently, we have proposed a novel method for the compression of time series based on mathematical models that explore dependencies between different time series. This r...
Hans-Peter Kriegel, Peer Kröger, Alexey Pryak...