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» A fast indexing approach for protein structure comparison
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BMCBI
2008
123views more  BMCBI 2008»
13 years 7 months ago
Validation of protein models by a neural network approach
Background: The development and improvement of reliable computational methods designed to evaluate the quality of protein models is relevant in the context of protein structure re...
Paolo Mereghetti, Maria Luisa Ganadu, Elena Papale...
SSDBM
2009
IEEE
192views Database» more  SSDBM 2009»
14 years 2 months ago
MLR-Index: An Index Structure for Fast and Scalable Similarity Search in High Dimensions
High-dimensional indexing has been very popularly used for performing similarity search over various data types such as multimedia (audio/image/video) databases, document collectio...
Rahul Malik, Sangkyum Kim, Xin Jin, Chandrasekar R...
PVLDB
2010
129views more  PVLDB 2010»
13 years 6 months ago
iGraph: A Framework for Comparisons of Disk-Based Graph Indexing Techniques
Graphs are of growing importance in modeling complex structures such as chemical compounds, proteins, images, and program dependence. Given a query graph Q, the subgraph isomorphi...
Wook-Shin Han, Jinsoo Lee, Minh-Duc Pham, Jeffrey ...
DASFAA
2008
IEEE
188views Database» more  DASFAA 2008»
14 years 2 months ago
Summarization Graph Indexing: Beyond Frequent Structure-Based Approach
Graph is an important data structure to model complex structural data, such as chemical compounds, proteins, and XML documents. Among many graph data-based applications, sub-graph ...
Lei Zou, Lei Chen 0002, Huaming Zhang, Yansheng Lu...
BMCBI
2010
131views more  BMCBI 2010»
13 years 2 months ago
Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity
Background: The dynamic motions of many proteins are central to their function. It therefore follows that the dynamic requirements of a protein are evolutionary constrained. In or...
Márton Münz, Rune B. Lyngsø, Jo...