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RECOMB
2005
Springer
16 years 4 months ago
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
Sing-Hoi Sze, Xiaoyan Zhao
RECOMB
2003
Springer
16 years 4 months ago
Large scale reconstruction of haplotypes from genotype data
Critical to the understanding of the genetic basis for complex diseases is the modeling of human variation. Most of this variation can be characterized by single nucleotide polymo...
Eleazar Eskin, Eran Halperin, Richard M. Karp
RECOMB
2002
Springer
16 years 4 months ago
A new approach to analyzing gene expression time series data
We present algorithms for time-series gene expression analysis that permit the principled estimation of unobserved timepoints, clustering, and dataset alignment. Each expression p...
Ziv Bar-Joseph, Georg Gerber, David K. Gifford, To...
DCC
2006
IEEE
16 years 3 months ago
The B-coder: An Improved Binary Arithmetic Coder and Probability Estimator
In this paper we present the B-coder, an efficient binary arithmetic coder that performs extremely well on a wide range of data. The B-coder should be classed as an `approximate&#...
Benjamin Kelly, David F. Brailsford
CVPR
2010
IEEE
16 years 1 days ago
Pareto Discriminant Analysis
Linear Discriminant Analysis (LDA) is a popular tool for multiclass discriminative dimensionality reduction. However, LDA suffers from two major problems: (1) It only optimizes th...
Karim Abou-Moustafa, Fernando De la Torre, Frank F...
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