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IPPS
2009
IEEE
14 years 2 months ago
High-order stencil computations on multicore clusters
Stencil computation (SC) is of critical importance for broad scientific and engineering applications. However, it is a challenge to optimize complex, highorder SC on emerging clus...
Liu Peng, Richard Seymour, Ken-ichi Nomura, Rajiv ...
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...
IISWC
2008
IEEE
14 years 1 months ago
Temporal streams in commercial server applications
Commercial server applications remain memory bound on modern multiprocessor systems because of their large data footprints, frequent sharing, complex non-strided access patterns, ...
Thomas F. Wenisch, Michael Ferdman, Anastasia Aila...
WOSP
1998
ACM
13 years 11 months ago
Poems: end-to-end performance design of large parallel adaptive computational systems
The POEMS project is creating an environment for end-to-end performance modeling of complex parallel and distributed systems, spanning the domains of application software, runti...
Ewa Deelman, Aditya Dube, Adolfy Hoisie, Yong Luo,...
BMCBI
2006
111views more  BMCBI 2006»
13 years 7 months ago
PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
Tomer Hertz, Chen Yanover