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BMCBI
2006
156views more  BMCBI 2006»
13 years 7 months ago
GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data
Background: Gene Ontology (GO) characterizes and categorizes the functions of genes and their products according to biological processes, molecular functions and cellular componen...
Hongmei Sun, Hong Fang, Tao Chen, Roger Perkins, W...
BMCBI
2004
207views more  BMCBI 2004»
13 years 7 months ago
Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resen
Background: Transcriptional regulation is a key mechanism in the functioning of the cell, and is mostly effected through transcription factors binding to specific recognition moti...
Davide Corà, Ferdinando Di Cunto, Paolo Pro...
QSIC
2007
IEEE
14 years 1 months ago
An Incremental and FCA-Based Ontology Construction Method for Semantics-Based Component Retrieval
In semantics-based component retrieval ontology is usually employed as the semantic basis for component representation and matching. Existing methods always assume that the ontolo...
Xin Peng, Wenyun Zhao
CIBCB
2005
IEEE
14 years 1 months ago
Functional Distances for Genes Based on GO Feature Maps and their Application to Clustering
— With the invention of high throughput methods, researchers are capable of producing large amounts of biological data. During the analysis of such data, the need for a functiona...
Nora Speer, Holger Fröhlich, Christian Spieth...
ICFP
2006
ACM
14 years 7 months ago
Algebraic fusion of functions with an accumulating parameter and its improvement
We present a unifying solution to the problem of fusion of functions, where both the producer function and the consumer function have one accumulating parameter. The key idea in t...
Shin-ya Katsumata, Susumu Nishimura