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» A geometric database for gene expression data
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VLDB
2004
ACM
143views Database» more  VLDB 2004»
14 years 1 months ago
GPX: Interactive Mining of Gene Expression Data
Discovering co-expressed genes and coherent expression patterns in gene expression data is an important data analysis task in bioinformatics research and biomedical applications. ...
Daxin Jiang, Jian Pei, Aidong Zhang
KDD
2008
ACM
206views Data Mining» more  KDD 2008»
14 years 9 months ago
Identifying biologically relevant genes via multiple heterogeneous data sources
Selection of genes that are differentially expressed and critical to a particular biological process has been a major challenge in post-array analysis. Recent development in bioin...
Zheng Zhao, Jiangxin Wang, Huan Liu, Jieping Ye, Y...
ICASSP
2011
IEEE
13 years 8 days ago
Biological pathway inference using manifold embedding
Disease occurs due to aberrant modulation of biological pathways. Identification of activated gene pathways from gene expression data is an important problem. In this work, we de...
Arvind Rao, Alfred O. Hero
BIRD
2007
Springer
154views Bioinformatics» more  BIRD 2007»
14 years 2 months ago
Mining Spatial Gene Expression Data for Association Rules
Abstract. We analyse data from the Edinburgh Mouse Atlas GeneExpression Database (EMAGE) which is a high quality data source for spatio-temporal gene expression patterns. Using a n...
Jano I. van Hemert, Richard A. Baldock
BTW
2003
Springer
94views Database» more  BTW 2003»
14 years 1 months ago
Comparative Evaluation of Microarray-based Gene Expression Databases
Microarrays make it possible to monitor the expression of thousands of genes in parallel thus generating huge amounts of data. So far, several databases have been developed for man...
Hong Hai Do, Toralf Kirsten, Erhard Rahm