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CIBB
2009
13 years 9 months ago
On the Use of Temporal Formal Logic to Model Gene Regulatory Networks
Modelling activities in molecular biology face the difficulty of prediction to link molecular knowledge with cell phenotypes. Even when the interaction graph between molecules is k...
Gilles Bernot, Jean-Paul Comet
WABI
2009
Springer
142views Bioinformatics» more  WABI 2009»
14 years 3 months ago
Back-Translation for Discovering Distant Protein Homologies
Background: Frameshift mutations in protein-coding DNA sequences produce a drastic change in the resulting protein sequence, which prevents classic protein alignment methods from ...
Marta Gîrdea, Laurent Noé, Gregory Ku...
DASC
2006
IEEE
14 years 7 days ago
Automated Caching of Behavioral Patterns for Efficient Run-Time Monitoring
Run-time monitoring is a powerful approach for dynamically detecting faults or malicious activity of software systems. However, there are often two obstacles to the implementation...
Natalia Stakhanova, Samik Basu, Robyn R. Lutz, Joh...
SDM
2012
SIAM
340views Data Mining» more  SDM 2012»
11 years 11 months ago
IntruMine: Mining Intruders in Untrustworthy Data of Cyber-physical Systems
A Cyber-Physical System (CPS) integrates physical (i.e., sensor) devices with cyber (i.e., informational) components to form a situation-aware system that responds intelligently t...
Lu An Tang, Quanquan Gu, Xiao Yu, Jiawei Han, Thom...
DAC
2005
ACM
14 years 9 months ago
Simulation based deadlock analysis for system level designs
In the design of highly complex, heterogeneous, and concurrent systems, deadlock detection and resolution remains an important issue. In this paper, we systematically analyze the ...
Xi Chen, Abhijit Davare, Harry Hsieh, Alberto L. S...