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» A method to predict social annotations
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BMCBI
2008
122views more  BMCBI 2008»
13 years 10 months ago
ESLpred2: improved method for predicting subcellular localization of eukaryotic proteins
Background: The expansion of raw protein sequence databases in the post genomic era and availability of fresh annotated sequences for major localizations particularly motivated us...
Aarti Garg, Gajendra P. S. Raghava
CSE
2009
IEEE
14 years 4 months ago
Web Science 2.0: Identifying Trends through Semantic Social Network Analysis
—We introduce a novel set of social network analysis based algorithms for mining the Web, blogs, and online forums to identify trends and find the people launching these new tren...
Peter A. Gloor, Jonas Krauss, Stefan Nann, Kai Fis...
JMLR
2010
133views more  JMLR 2010»
13 years 4 months ago
Hierarchical Cost-Sensitive Algorithms for Genome-Wide Gene Function Prediction
In this work we propose new ensemble methods for the hierarchical classification of gene functions. Our methods exploit the hierarchical relationships between the classes in diffe...
Nicolò Cesa-Bianchi, Giorgio Valentini
BIOINFORMATICS
2007
74views more  BIOINFORMATICS 2007»
13 years 10 months ago
Simultaneous alignment and annotation of cis-regulatory regions
Genomic transcriptional processes rely heavily on the combinatorial binding of transcription factors on the upstream regions of genes. Analysis and complete characterization of su...
Abha Singh Bais, Steffen Grossmann, Martin Vingron
BMCBI
2010
121views more  BMCBI 2010»
13 years 10 months ago
Knowledge-based annotation of small molecule binding sites in proteins
Background: The study of protein-small molecule interactions is vital for understanding protein function and for practical applications in drug discovery. To benefit from the rapi...
Ratna R. Thangudu, Manoj Tyagi, Benjamin A. Shoema...