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KES
2007
Springer
14 years 1 months ago
A Hybrid Symbolic-Statistical Approach to Modeling Metabolic Networks
Biological systems consist of many components and interactions between them. In Systems Biology the principal problem is modeling complex biological systems and reconstructing inte...
Marenglen Biba, Stefano Ferilli, Nicola Di Mauro, ...
BIOADIT
2004
Springer
14 years 29 days ago
Dynamic Self-Assembly and Computation: From Biological to Information Systems
We present two ways in which dynamic self-assembly can be used to perform computation, via stochastic protein networks and self-assembling software. We describe our protein-emulati...
Ann M. Bouchard, Gordon C. Osbourn
JCB
2002
131views more  JCB 2002»
13 years 7 months ago
Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The reg...
Hidde de Jong
LADC
2005
Springer
14 years 1 months ago
Quantitative Evaluation of Distributed Algorithms Using the Neko Framework: The NekoStat Extension
In this paper we present NekoStat, an extension of the Neko tool. Neko is a Java framework and a communication platform that permits rapid prototyping of distributed applications; ...
Lorenzo Falai, Andrea Bondavalli, Felicita Di Gian...
BMCBI
2006
145views more  BMCBI 2006»
13 years 7 months ago
GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes
Background: Successful realization of a "systems biology" approach to analyzing cells is a grand challenge for our understanding of life. However, current modeling appro...
Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yo...