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BMCBI
2006
170views more  BMCBI 2006»
13 years 7 months ago
Biclustering of gene expression data by non-smooth non-negative matrix factorization
Background: The extended use of microarray technologies has enabled the generation and accumulation of gene expression datasets that contain expression levels of thousands of gene...
Pedro Carmona-Saez, Roberto D. Pascual-Marqui, Fra...
ICWSM
2009
13 years 5 months ago
Gephi: An Open Source Software for Exploring and Manipulating Networks
Gephi is an open source software for graph and network analysis. It uses a 3D render engine to display large networks in real-time and to speed up the exploration. A flexible and ...
Mathieu Bastian, Sebastien Heymann, Mathieu Jacomy
BMCBI
2008
173views more  BMCBI 2008»
13 years 7 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...
SIGIR
2005
ACM
14 years 1 months ago
Orthogonal locality preserving indexing
We consider the problem of document indexing and representation. Recently, Locality Preserving Indexing (LPI) was proposed for learning a compact document subspace. Different from...
Deng Cai, Xiaofei He
KDD
2004
ACM
126views Data Mining» more  KDD 2004»
14 years 8 months ago
Efficient closed pattern mining in the presence of tough block constraints
In recent years, various constrained frequent pattern mining problem formulations and associated algorithms have been developed that enable the user to specify various itemsetbase...
Krishna Gade, Jianyong Wang, George Karypis