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» A new approach to nonrepetitive sequences
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ECML
2007
Springer
13 years 12 months ago
Sequence Labeling with Reinforcement Learning and Ranking Algorithms
Many problems in areas such as Natural Language Processing, Information Retrieval, or Bioinformatic involve the generic task of sequence labeling. In many cases, the aim is to assi...
Francis Maes, Ludovic Denoyer, Patrick Gallinari
DCC
2010
IEEE
14 years 5 months ago
Advantages of Shared Data Structures for Sequences of Balanced Parentheses
We propose new data structures for navigation in sequences of balanced parentheses, a standard tool for representing compressed trees. The most striking property of our approach is...
Simon Gog, Johannes Fischer
CORR
2008
Springer
115views Education» more  CORR 2008»
13 years 10 months ago
Determining the Unithood of Word Sequences using Mutual Information and Independence Measure
Most works related to unithood were conducted as part of a larger effort for the determination of termhood. Consequently, the number of independent research that study the notion ...
Wilson Wong, Wei Liu, Mohammed Bennamoun
BMCBI
2011
13 years 1 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
BMCBI
2005
140views more  BMCBI 2005»
13 years 10 months ago
JACOP: A simple and robust method for the automated classification of protein sequences with modular architecture
Background: Whole-genome sequencing projects are rapidly producing an enormous number of new sequences. Consequently almost every family of proteins now contains hundreds of membe...
Peter Sperisen, Marco Pagni