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» A new approach to nonrepetitive sequences
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ICASSP
2010
IEEE
13 years 5 months ago
Using reed-muller sequences as deterministic compressed sensing matrices for image reconstruction
An image reconstruction algorithm using compressed sensing (CS) with deterministic matrices of second-order ReedMuller (RM) sequences is introduced. The 1D algorithm of Howard et ...
Kangyu Ni, Somantika Datta, Prasun Mahanti, Svetla...
ICDE
2010
IEEE
199views Database» more  ICDE 2010»
14 years 5 months ago
Mining mutation chains in biological sequences
— The increasing infectious disease outbreaks has led to a need for new research to better understand the disease’s origins, epidemiological features and pathogenicity caused b...
Chang Sheng, Wynne Hsu, Mong-Li Lee, Joo Chuan Ton...
IPPS
2009
IEEE
14 years 4 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
ICASSP
2007
IEEE
14 years 4 months ago
Fast Search of Sequences with Complex Symbol Correlations using Profile Context-Sensitive HMMS and Pre-Screening Filters
Recently, profile context-sensitive HMMs (profile-csHMMs) have been proposed which are very effective in modeling the common patterns and motifs in related symbol sequences. Pro...
Byung-Jun Yoon, P. P. Vaidyanathan
SAC
2006
ACM
14 years 4 months ago
Looking for monotonicity properties of a similarity constraint on sequences
Constraint-based mining techniques on sequence databases have been studied extensively the last few years and efficient algorithms enable to compute complete collections of patte...
Ieva Mitasiunaite, Jean-François Boulicaut