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BMCBI
2010
202views more  BMCBI 2010»
13 years 7 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader
ASAP
2010
IEEE
143views Hardware» more  ASAP 2010»
13 years 9 months ago
Loop transformations for interface-based hierarchies IN SDF graphs
Data-flow has proven to be an attractive computation model for programming digital signal processing (DSP) applications. A restricted version of data-flow, termed synchronous data...
Jonathan Piat, Shuvra S. Bhattacharyya, Mickaë...
JMLR
2012
11 years 9 months ago
Random Search for Hyper-Parameter Optimization
Grid search and manual search are the most widely used strategies for hyper-parameter optimization. This paper shows empirically and theoretically that randomly chosen trials are ...
James Bergstra, Yoshua Bengio
PADS
2003
ACM
14 years 19 days ago
Reducing the Size of Routing Tables for Large-scale Network Simulation
In simulating large-scale networks, due to the limitation of available resources on computers, the size of the networks and the scale of simulation scenarios are often restricted....
Akihito Hiromori, Hirozumi Yamaguchi, Keiichi Yasu...
BMCBI
2010
161views more  BMCBI 2010»
13 years 4 months ago
LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes
Background: Physical maps are the substrate of genome sequencing and map-based cloning and their construction relies on the accurate assembly of BAC clones into large contigs that...
Zeev Frenkel, Etienne Paux, David I. Mester, Cathe...