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ISAAC
2007
Springer
146views Algorithms» more  ISAAC 2007»
14 years 1 months ago
Bounded Tree-Width and CSP-Related Problems
We study the complexity of structurally restricted homomorphism and constraint satisfaction problems. For every class of relational structures C, let LHOM(C, _) be the problem of d...
Tommy Färnqvist, Peter Jonsson
LATA
2009
Springer
14 years 2 months ago
From Gene Trees to Species Trees through a Supertree Approach
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...
Celine Scornavacca, Vincent Berry, Vincent Ranwez
COCOON
2006
Springer
13 years 11 months ago
Reconciling Gene Trees with Apparent Polytomies
We consider the problem of reconciling gene trees with a species tree based on the widely accepted Gene Duplication model from Goodman et al. Current algorithms that solve this pro...
Wen-Chieh Chang 0002, Oliver Eulenstein
FAW
2009
Springer
134views Algorithms» more  FAW 2009»
14 years 2 months ago
Pathwidth is NP-Hard for Weighted Trees
The pathwidth of a graph G is the minimum clique number of H minus one, over all interval supergraphs H of G. We prove in this paper that the PATHWIDTH problem is NP-hard for parti...
Rodica Mihai, Ioan Todinca
AI
2007
Springer
13 years 7 months ago
Determining the consistency of partial tree descriptions
We present an efficient algorithm that checks the consistency of partial descriptions of ordered trees. The constraint language of these descriptions was introduced by Cornell in c...
Manuel Bodirsky, Martin Kutz