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» A protein interaction based model for schizophrenia study
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ANSS
2006
IEEE
14 years 2 months ago
iSimBioSys: A Discrete Event Simulation Platform for 'in silico' study of biological systems
With the availability of huge databases cataloguing the various molecular “parts” of complex biological systems, researchers from multiple disciplines have focused on developi...
Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. ...
FORTE
2007
13 years 10 months ago
Specifying and Composing Interaction Protocols for Service-Oriented System Modelling
Abstract. We present and discuss a formal, high-level approach to the specification and composition of interaction protocols for service-oriented systems. This work is being develo...
João Abreu, Laura Bocchi, José Luiz ...
BMCBI
2006
159views more  BMCBI 2006»
13 years 9 months ago
EpiJen: a server for multistep T cell epitope prediction
Background: The main processing pathway for MHC class I ligands involves degradation of proteins by the proteasome, followed by transport of products by the transporter associated...
Irini A. Doytchinova, Pingping Guan, Darren R. Flo...
CIBCB
2005
IEEE
13 years 10 months ago
A Transcriptional Approach to Gene Clustering
— We present an integrative method for clustering coregulated genes and elucidating their underlying regulatory mechanisms. We use multi-state partition functions and thermodynam...
Ilias Tagkopoulos
JCC
2011
154views more  JCC 2011»
12 years 11 months ago
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...