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» A query language for biological networks
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HICSS
2005
IEEE
122views Biometrics» more  HICSS 2005»
14 years 1 months ago
Expressive and Efficient Peer-to-Peer Queries
It is demonstrated how to provide a peer-to-peer system that supports an expressive query language while maintaining efficient distribution over a wide-area network. The key is to...
Dennis Heimbigner
BMCBI
2010
164views more  BMCBI 2010»
13 years 7 months ago
Flexible network reconstruction from relational databases with Cytoscape and CytoSQL
Background: Molecular interaction networks can be efficiently studied using network visualization software such as Cytoscape. The relevant nodes, edges and their attributes can be...
Kris Laukens, Jens Hollunder, Thanh Hai Dang, Geer...
BMCBI
2006
147views more  BMCBI 2006»
13 years 7 months ago
QPath: a method for querying pathways in a protein-protein interaction network
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sh...
BIBE
2006
IEEE
184views Bioinformatics» more  BIBE 2006»
14 years 1 months ago
A Language Modeling Text Mining Approach to the Annotation of Protein Community
This paper discusses an ontology based language modeling text mining approach to the annotation of protein community. Communities appear to play an important role in the functional...
Xiaodan Zhang, Daniel Duanqing Wu, Xiaohua Zhou, X...
EDBT
2008
ACM
169views Database» more  EDBT 2008»
14 years 7 months ago
BioScout: a life-science query monitoring system
Scientific data are available through an increasing number of heterogeneous, independently evolving, sources. Although the sources themselves are independently evolving, the data ...
Anastasios Kementsietsidis, Frank Neven, Dieter Va...