110 search results - page 12 / 22 » A scalable algorithm for clustering protein sequences |
ISBRA
2007
Springer
14 years 2 months ago
2007
Springer
Clustering algorithms are employed in many bioinformatics tasks, including categorization of protein sequences and analysis of gene-expression data. Although these algorithms are r...
ISMB
1994
13 years 9 months ago
1994
A new version of the GRAIL system (Uberbacher and Mural, 1991; Mural et al., 1992; Uberbacher et al., 1993), called GRAILII, has recently been developed (Xu et al., 1994). GRAILII...
CORR
2010
Springer
13 years 8 months ago
2010
Springer
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model ...
BIBE
2003
IEEE
14 years 1 months ago
2003
IEEE
Hierarchical metric-space clustering methods have been commonly used to organize proteomes into taxonomies. Consequently, it is often anticipated that hierarchical clustering can ...
SC
2003
ACM
14 years 1 months ago
2003
ACM
This paper presents a novel, parallel algorithm for generating top alignments. Top alignments are used for finding internal repeats in biological sequences like proteins and gene...