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» A stable gene selection in microarray data analysis
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BMCBI
2010
153views more  BMCBI 2010»
15 years 2 months ago
Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is an assay used for investigating DNA-protein-binding or post-translational chromatin/histone ...
Benedikt Zacher, Pei Fen Kuan, Achim Tresch
125
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KDD
2005
ACM
137views Data Mining» more  KDD 2005»
16 years 3 months ago
Pattern-based similarity search for microarray data
One fundamental task in near-neighbor search as well as other similarity matching efforts is to find a distance function that can efficiently quantify the similarity between two o...
Haixun Wang, Jian Pei, Philip S. Yu
149
Voted
IJBRA
2010
89views more  IJBRA 2010»
15 years 1 months ago
Strategies for enhanced annotation of a microarray probe set
—We aim to determine the biological relevance of genes identified through microarray-mediated transcriptional profiling of Xenopus sensory organs and brain tissue. Genetic data...
TuShun R. Powers, Selene M. Virk, Elba E. Serrano
115
Voted
BMCBI
2006
95views more  BMCBI 2006»
15 years 2 months ago
A simple method for assessing sample sizes in microarray experiments
In this short article, we discuss a simple method for assessing sample size requirements in microarray experiments. Our method starts with the output from a permutation-based anal...
Robert Tibshirani
129
Voted
BMCBI
2006
169views more  BMCBI 2006»
15 years 2 months ago
Finding biological process modifications in cancer tissues by mining gene expression correlations
Background: Through the use of DNA microarrays it is now possible to obtain quantitative measurements of the expression of thousands of genes from a biological sample. This techno...
Giacomo Gamberoni, Sergio Storari, Stefano Volinia