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» A statistical approach for array CGH data analysis
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PLDI
2009
ACM
14 years 9 months ago
Automatic generation of library bindings using static analysis
High-level languages are growing in popularity. However, decades of C software development have produced large libraries of fast, timetested, meritorious code that are impractical...
Tristan Ravitch, Steve Jackson, Eric Aderhold, Ben...
BMCBI
2008
124views more  BMCBI 2008»
13 years 9 months ago
A probe-treatment-reference (PTR) model for the analysis of oligonucleotide expression microarrays
Background: Microarray pre-processing usually consists of normalization and summarization. Normalization aims to remove non-biological variations across different arrays. The norm...
Huanying Ge, Chao Cheng, Lei M. Li
KDD
2004
ACM
158views Data Mining» more  KDD 2004»
14 years 9 months ago
A generalized maximum entropy approach to bregman co-clustering and matrix approximation
Co-clustering is a powerful data mining technique with varied applications such as text clustering, microarray analysis and recommender systems. Recently, an informationtheoretic ...
Arindam Banerjee, Inderjit S. Dhillon, Joydeep Gho...
BMCBI
2008
132views more  BMCBI 2008»
13 years 9 months ago
Mixture models for analysis of melting temperature data
Background: In addition to their use in detecting undesired real-time PCR products, melting temperatures are useful for detecting variations in the desired target sequences. Metho...
Christoffer Nellåker, Fredrik Uhrzander, Joa...
BMCBI
2010
154views more  BMCBI 2010»
13 years 9 months ago
Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
Background: A major goal of molecular biology is determining the mechanisms that control the transcription of genes. Motif Enrichment Analysis (MEA) seeks to determine which DNA-b...
Robert C. McLeay, Timothy L. Bailey