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» A statistical approach for array CGH data analysis
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BMCBI
2010
97views more  BMCBI 2010»
13 years 9 months ago
Biomarker discovery in heterogeneous tissue samples -taking the in-silico deconfounding approach
Background: For heterogeneous tissues, such as blood, measurements of gene expression are confounded by relative proportions of cell types involved. Conclusions have to rely on es...
Dirk Repsilber, Sabine Kern, Anna Telaar, Gerhard ...
WWW
2008
ACM
14 years 9 months ago
Topic modeling with network regularization
In this paper, we formally define the problem of topic modeling with network structure (TMN). We propose a novel solution to this problem, which regularizes a statistical topic mo...
Qiaozhu Mei, Deng Cai, Duo Zhang, ChengXiang Zhai
FDL
2005
IEEE
14 years 2 months ago
SystemC-Based Communication and Performance Analysis
In today’s electronic system-level (ESL) design processes, an early analysis of a system’s communication and nce characteristics is becoming a key challenge. The availability ...
Axel G. Braun, Joachim Gerlach, Wolfgang Rosenstie...
BMCBI
2008
122views more  BMCBI 2008»
13 years 9 months ago
Determining gene expression on a single pair of microarrays
Background: In microarray experiments the numbers of replicates are often limited due to factors such as cost, availability of sample or poor hybridization. There are currently fe...
Robert W. Reid, Anthony A. Fodor
ITSSA
2006
109views more  ITSSA 2006»
13 years 9 months ago
Gene Expression Analysis in Multi-Agent Environment
Abstract. This paper presents a multi-agent approach to gene expression analysis and illustrates the working steps using real dataset produced from a microarray experiment. The ana...
H. C. Lam, M. Vazquez, B. Juneja, Scott C. Fahrenk...