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» A stochastic particle-based biological system simulator
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CORR
2009
Springer
68views Education» more  CORR 2009»
13 years 5 months ago
On the Interpretation of Delays in Delay Stochastic Simulation of Biological Systems
Roberto Barbuti, Giulio Caravagna, Paolo Milazzo, ...
CORR
2010
Springer
105views Education» more  CORR 2010»
13 years 4 months ago
On Designing Multicore-aware Simulators for Biological Systems
The stochastic simulation of biological systems is an increasingly popular technique in bioinformatics. It often is an enlightening technique, which may however result in being com...
Marco Aldinucci, Mario Coppo, Ferruccio Damiani, M...
CMSB
2007
Springer
13 years 11 months ago
Efficient, Correct Simulation of Biological Processes in the Stochastic Pi-calculus
This paper presents a simulation algorithm for the stochastic -calculus, designed for the efficient simulation of biological systems with large numbers of molecules. The cost of a ...
Andrew Phillips, Luca Cardelli
SCSC
2007
13 years 8 months ago
A stochastic particle-based biological system simulator
Laurier Boulianne, Michel Dumontier, Warren J. Gro...