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POPL
2008
ACM
14 years 11 months ago
Automatic inference of stationary fields: a generalization of java's final fields
Java programmers can document that the relationship between two objects is unchanging by declaring the field that encodes that relationship to be final. This information can be us...
Christopher Unkel, Monica S. Lam
BMCBI
2008
129views more  BMCBI 2008»
13 years 11 months ago
Motif-directed network component analysis for regulatory network inference
Background: Network Component Analysis (NCA) has shown its effectiveness in discovering regulators and inferring transcription factor activities (TFAs) when both microarray data a...
Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Wan...
RECOMB
2005
Springer
14 years 11 months ago
The Factor Graph Network Model for Biological Systems
Abstract. We introduce an extended computational framework for studying biological systems. Our approach combines formalization of existing qualitative models that are in wide but ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...
IJCV
2008
188views more  IJCV 2008»
13 years 10 months ago
Partial Linear Gaussian Models for Tracking in Image Sequences Using Sequential Monte Carlo Methods
The recent development of Sequential Monte Carlo methods (also called particle filters) has enabled the definition of efficient algorithms for tracking applications in image sequen...
Elise Arnaud, Étienne Mémin
BMCBI
2010
185views more  BMCBI 2010»
13 years 5 months ago
MetaPIGA v2.0: maximum likelihood large phylogeny estimation using the metapopulation genetic algorithm and other stochastic heu
Background: The development, in the last decade, of stochastic heuristics implemented in robust application softwares has made large phylogeny inference a key step in most compara...
Raphaël Helaers, Michel C. Milinkovitch