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POPL
2009
ACM
14 years 8 months ago
Compositional shape analysis by means of bi-abduction
This paper describes a compositional shape analysis, where each procedure is analyzed independently of its callers. The analysis uses an abstract domain based on a restricted frag...
Cristiano Calcagno, Dino Distefano, Peter W. O'Hea...
LCPC
2007
Springer
14 years 1 months ago
Associative Parallel Containers in STAPL
The Standard Template Adaptive Parallel Library (stapl) is a parallel programming framework that extends C++ and stl with support for parallelism. stapl provides a collection of pa...
Gabriel Tanase, Chidambareswaran Raman, Mauro Bian...
ALMOB
2006
155views more  ALMOB 2006»
13 years 7 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg
BMCBI
2010
147views more  BMCBI 2010»
13 years 7 months ago
Automatic detection of anchor points for multiple sequence alignment
Background: Determining beforehand specific positions to align (anchor points) has proved valuable for the accuracy of automated multiple sequence alignment (MSA) software. This f...
Florian Pitschi, Claudine Devauchelle, Eduardo Cor...
POPL
2007
ACM
14 years 8 months ago
Dynamic heap type inference for program understanding and debugging
C programs can be difficult to debug due to lax type enforcement and low-level access to memory. We present a dynamic analysis for C that checks heap snapshots for consistency wit...
Ben Liblit, Chloë W. Schulze, Marina Polishch...