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BMCBI
2008
112views more  BMCBI 2008»
13 years 9 months ago
A simplified approach to disulfide connectivity prediction from protein sequences
Background: Prediction of disulfide bridges from protein sequences is useful for characterizing structural and functional properties of proteins. Several methods based on differen...
Marc Vincent, Andrea Passerini, Matthieu Labb&eacu...
ALIFE
2006
13 years 9 months ago
The Origin of the Eukaryotic Cell Based on Conservation of Existing Interfaces
Current theories about the origin of the eukaryotic cell all assume that during evolution a prokaryotic cell acquired a nucleus. Here, it is shown that a scenario in which the nucl...
Albert D. G. de Roos
GCB
2005
Springer
117views Biometrics» more  GCB 2005»
14 years 3 months ago
Generation of 3D templates of active sites of proteins with rigid prosthetic groups
Motivation: With the increasing availability of protein structures, the generation of biologically meaningful 3D patterns from the simultaneous alignment of several protein struct...
Jean-Christophe Nebel
NAR
2008
152views more  NAR 2008»
13 years 9 months ago
PROMALS3D web server for accurate multiple protein sequence and structure alignments
Multiple sequence alignments are essential in computational sequence and structural analysis, with applications in homology detection, structure modeling, function prediction and ...
Jimin Pei, Ming Tang, Nick V. Grishin
CIBCB
2005
IEEE
14 years 3 months ago
Predicting Peroxisomal Proteins
— PTS1 proteins are peroxisomal matrix proteins that have a well conserved targeting motif at the C-terminal end. However, this motif is present in many non peroxisomal proteins ...
John Hawkins, Mikael Bodén