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BMCBI
2006
150views more  BMCBI 2006»
13 years 9 months ago
Predicting protein subcellular locations using hierarchical ensemble of Bayesian classifiers based on Markov chains
Background: The subcellular location of a protein is closely related to its function. It would be worthwhile to develop a method to predict the subcellular location for a given pr...
Alla Bulashevska, Roland Eils
RSCTC
2004
Springer
150views Fuzzy Logic» more  RSCTC 2004»
14 years 3 months ago
Extracting Protein-Protein Interaction Sentences by Applying Rough Set Data Analysis
illion abstracts. Problem. How to find sentences that talk about protein-protein interactions? Example (Non-Interaction Sentence) All our data are consistent with models in which ...
Filip Ginter, Tapio Pahikkala, Sampo Pyysalo, Jorm...
BMCBI
2007
142views more  BMCBI 2007»
13 years 9 months ago
Support Vector Machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary informa
Background: In past number of methods have been developed for predicting subcellular location of eukaryotic, prokaryotic (Gram-negative and Gram-positive bacteria) and human prote...
Mamoon Rashid, Sudipto Saha, Gajendra P. S. Raghav...
HPCA
1999
IEEE
14 years 1 months ago
Using Lamport Clocks to Reason about Relaxed Memory Models
Cache coherence protocols of current shared-memory multiprocessors are difficult to verify. Our previous work proposed an extension of Lamport's logical clocks for showing th...
Anne Condon, Mark D. Hill, Manoj Plakal, Daniel J....
HPDC
2010
IEEE
13 years 10 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker