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ISMB
1993
13 years 11 months ago
Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families
A Bayesian method for estimating the amino acid distributions in the states of a hidden Markov model (HMM) for a protein familyor the columns of a multiple alignment of that famil...
Michael Brown, Richard Hughey, Anders Krogh, I. Sa...
IFIP
2010
Springer
13 years 4 months ago
Reasoning about Probabilistic Security Using Task-PIOAs
Abstract. Task-structured probabilistic input/output automata (taskPIOAs) are concurrent probabilistic automata that, among other things, have been used to provide a formal framewo...
Aaron D. Jaggard, Catherine Meadows, Michael Mislo...
BMCBI
2010
117views more  BMCBI 2010»
13 years 9 months ago
Identification of NAD interacting residues in proteins
Background: Small molecular cofactors or ligands play a crucial role in the proper functioning of cells. Accurate annotation of their target proteins and binding sites is required...
Hifzur Rahman Ansari, Gajendra P. S. Raghava
GCB
1997
Springer
74views Biometrics» more  GCB 1997»
14 years 1 months ago
Using constraint programming for lattice protein folding
We present a global search technique for nding the global minimal conformation of a sequence in Dill's HP-lattice model5;6 . The HP-lattice model is a simpli ed model of prot...
Rolf Backofen